Beginning Perl for Bioinformatics

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I
 identity between random DNA sequences, calculating average
 if statements , 2nd
 inside a while loop, formatting
 if-else statements
 example
 if-elsif-else statements
 imaginary numbers
 imperative programming
 in silico studies
 incrementing variables , 2nd
 for loop
indexing
 frame translation program
 GenBank with DBM
 scalar values in arrays
 inequality, testing for
initializing
 arrays
 hashes with key-value pairs
 variables
 input
from files
 named on command line
 line input (angle) operator
 STDIN (standard input) , 2nd
 user, getting from keyboard
 input operators
 input record separator ($/)
 installing Perl
 binary vs. source code distributions
 downloading
 finding already installed
 Internet access not available
 on Unix or Linux
 on Windows
 int function , 2nd
 integers , 2nd
 Internet access, Perl installation and
 interpolating variables
 into here documents
 into string matches
interpreter, Perl
 calling from command line
 code formats and
 interpreters
 intractable problems
 IUB (nucleic acid) ambiguity codes, translating to regular expressions
 iub3to1 subroutine

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